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CentroidFold predicts an RNA secondary structure from an RNA sequence. FASTA and one-sequence-in-a-line format are accepted for predicting a secondary structure per sequence. It also predicts a consensus secondary structure when a multiple alignment (CLUSTALW format) is given. Currently, the input sequence should be less than or equal to 2000 bases. For more information, here is Help page or more details can be found here.

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