FR022599
- Summary
- Sequence
- Secondary Structure
| Summary | |
|---|---|
| ID | FR022599 |
| Description | ubiquitin protein ligase E3A (UBE3A) antisense RNA |
| Accession | AY421730 |
| Sequence Ontology | antisense_RNA |
| Organism | |
| Genome Mapping | |
| human(hg18) 1 region | chr15:22873106-22879699(+)  |
| Cross Reference | |
| Gene Association / Sense Overlap / Intron | |
| human(hg18) | DKFZp686M12165 (uc001yxh.1 , uc001yxm.1 , uc001yxn.2 , uc001yxy.2 ) |
| Gene Association / Sense Overlap / 3'UTR | |
| human(hg18) | NR_003331 (uc001yya.1 ), NR_003330 (uc001yxz.1 ), NR_003327 (uc001yxv.1 ), NR_003328 (uc001yxw.1 ), NR_003329 (uc001yxx.1 ), DKFZp686M12165 (uc001yxh.1 , uc001yxm.1 , uc001yxn.2 , uc001yxy.2 , uc001yyb.2 ) |
| Sequence Similarity | |
| MicroArray / Affymetrix GeneChip Exon Array / hg18 | ||
|---|---|---|
| Probe | Transcript Cluster | Probe Locus |
| 2497348 | 3584443 |
chr15:22873123-22873147(+) |
| 4286742 | 3584443 |
chr15:22873139-22873163(+) |
| 70607 | 3584443 |
chr15:22873172-22873196(+) |
| 1026397 | 3584443 |
chr15:22873201-22873225(+) |
| 4117830 | 3584443 |
chr15:22873291-22873315(+) |
| 188568 | 3584443 |
chr15:22873308-22873332(+) |
| 80907 | 3584443 |
chr15:22873340-22873364(+) |
| 3895195 | 3584443 |
chr15:22873358-22873382(+) |
| MicroArray / Invitrogen Ncode Noncoding RNA Array / hg18 | ||
|---|---|---|
| Probe | Target Transcript | Probe Locus |
| IVGNh29372 | UC001YXV |
chr15:22873296-22873356(+) |
| Reference | |
|---|---|
|
RNAdb--a comprehensive mammalian noncoding RNA database.
Pang KC.,Stephen S.,Engström PG.,Tajul-Arifin K.,Chen W.,Wahlestedt C.,Lenhard B.,Hayashizaki Y. and Mattick JS. Nucleic Acids Res 33 (Database issue), D125-30 (2005)
NONCODE: an integrated knowledge database of non-coding RNAs.
Liu C.,Bai B.,Skogerbø G.,Cai L.,Deng W.,Zhang Y.,Bu D.,Zhao Y. and Chen R. Nucleic Acids Res 33 (Database issue), D112-5 (2005)
The IC-SNURF-SNRPN transcript serves as a host for multiple small nucleolar RNA species and as an antisense RNA for UBE3A.
Runte M.,Hüttenhofer A.,Gross S.,Kiefmann M.,Horsthemke B. and Buiting K. Hum Mol Genet 10 (23), 2687-700 (2001)
An imprinted antisense RNA overlaps UBE3A and a second maternally expressed transcript.
Rougeulle C.,Cardoso C.,Fontés M.,Colleaux L. and Lalande M. Nat Genet 19 (1), 15-6 (1998) | |
