FR033161

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  • Summary
  • Sequence
  • Secondary Structure
Evidence Mapping [seqmap]
seqmap with no-mismatch, no-gap and no-repeat
Summary
ID FR033161
Description Piwi-interacting RNA (piRNA)
Accession DQ575323
Sequence Ontology piRNA
Organism
Homo sapiens human , man
Genome Mapping
human(hg18)           1 region chr1:115074466-115074494(-) 
Cross Reference
RNAdb v2.0 PIR36434
Gene Association / Sense Overlap / 5'UTR
human(hg18) KIAA0885 (uc001efj.1 )
Gene Association / Sense Overlap / Exon
human(hg18) CSDE1 (uc001efi.1 , uc001efk.1 , uc001efl.1 , uc001efm.1 , uc001efn.1 , uc009wgv.1 )
Sequence Similarity
  

OMIM
IDTitleLocus
191510  COLD-SHOCK DOMAIN-CONTAINING E1, RNA-BINDING; CSDE1
GENE UPSTREAM OF NRAS
UNR
D1S155E
 1p22(chr1:84700001-94500000)

MicroArray / Affymetrix GeneChip Exon Array / hg18
ProbeTranscript ClusterProbe Locus
3645470 2429277  chr1:115074466-115074490(-) 

Reference
A germline-specific class of small RNAs binds mammalian Piwi proteins.
Girard A.,Sachidanandam R.,Hannon GJ. and Carmell MA.
Nature 442 (7099), 199-202 (2006)
RNAdb--a comprehensive mammalian noncoding RNA database.
Pang KC.,Stephen S.,Engström PG.,Tajul-Arifin K.,Chen W.,Wahlestedt C.,Lenhard B.,Hayashizaki Y. and Mattick JS.
Nucleic Acids Res 33 (Database issue), D125-30 (2005)

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