FR044562

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  • Summary
  • Sequence
  • Secondary Structure
Evidence Mapping [blat]
blat with identity=99, coverage=90 and no-repeat
Evidence Sequence Similarity [highly similar]
Almost same sequences with one mismatch or one gap
Summary
ID FR044562
Description spleen focus forming virus proviral integration oncogene spi1 (Spi-1 / PU.1) 5' untraslated region (UTR) regulatory element
Accession U34046 , X52056
Sequence Ontology five_prime_UTR
Organism
Homo sapiens human , man
Genome Mapping
human(hg18)           1 region chr11:47356463-47356630(-) 
Cross Reference
Rfam v8.1 RF00232
Gene Association / Sense Overlap / 5'UTR
human(hg18) SPI1 (uc001nfb.1 , uc001nfc.1 , uc009ylp.1 )
Gene Association / Sense Overlap / Exon
human(hg18) SPI1 (uc001nfb.1 , uc001nfc.1 )
Gene Association / AntiSense Overlap / Intron
human(hg18) SLC39A13 (uc001nfd.2 )
Sequence Similarity
highly similar FR069904   spleen focus forming virus proviral integration oncogene spi1 (Spi-1 / PU.1) 5' untraslated region (UTR) regulatory element

OMIM
IDTitleLocus
165170  SPLEEN FOCUS FORMING VIRUS PROVIRAL INTEGRATION ONCOGENE SPI1; SPI1
ONCOGENE SPI1
SFFV VIRUS-INDUCED MURINE ERYTHROLEUKEMIA ONCOGENE, MOUSE, HOMOLOG OF
HEMATOPOIETIC TRANSCRIPTION FACTOR PU.1
 11p11.2(chr11:43400001-48800000)

MicroArray / Affymetrix GeneChip Exon Array / hg18
ProbeTranscript ClusterProbe Locus
6053895 3372174  chr11:47356472-47356496(-) 

Reference
The conserved 5'-untranslated leader of Spi-1 (PU.1) mRNA is highly structured and potently inhibits translation in vitro but not in vivo.
Hensold JO.,Stratton CA. and Barth D.
Nucleic Acids Res 25 (14), 2869-76 (1997)

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