fRNAdb - Detail Page [FR076017]

FR076017

Summary
Sequence
Secondary Structure

Evidence Mapping [blat]

blat with identity=99, coverage=90 and no-repeat

Summary
ID	FR076017
Description	precursor micro RNA (miRNA) mir-302c
Accession
Sequence Ontology	pre_miRNA
Organism
Homo sapiens	human , man
Genome Mapping
human(hg18) 1 region	chr4:113788968-113789035(-)
Cross Reference
miRBase v9.2	MI0000773
Gene Association / AntiSense Overlap / Intron
human(hg18)	DKFZp564K112 (uc003iba.1 ), LARP7 (uc003iay.1 , uc003iaz.1 , uc003ibb.1 )
Gene Association / Transcription Neighbor / dwstream
human(hg18)	DJ087796 (uc010imq.1 )
Sequence Similarity

OMIM
ID	Title	Locus
612026	La RIBONUCLEOPROTEIN DOMAIN FAMILY, MEMBER 7; LARP7 PTEFB INTERACTION PROTEIN FOR 7SK STABILITY; PIP7S	4q25(chr4:107900001-114100000)

Reference
Human embryonic stem cells express a unique set of microRNAs. Suh MR.,Lee Y.,Kim JY.,Kim SK.,Moon SH.,Lee JY.,Cha KY.,Chung HM.,Yoon HS.,Moon SY.,Kim VN. and Kim KS. Dev Biol 270 (2), 488-98 (2004)

Evidence :

Evidence Secondary Structure [putative(miRBase)]

Putative secondary structure predicted by miRBase.

Click here to view the PDF file.

0         1         2         3         4         5         6
CCUUUGCUUUAACAUGGGGGUACCUGCUGUGUGAAACAAAAGUAAGUGCUUCCAUGUUUCAGUGGAGG
((((..((..(((((((((((((.((((.((.....))..)))).)))))))))))))..))..))))

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