FR086231
- Summary
- Sequence
- Secondary Structure
Evidence : putative(CentroidAlign)
Evidence Secondary Structure [putative(CentroidAlign)]
Putative secondary structure predicted by CentroidAlign.
offset 0 1 2 3 4 5 6 FR086231 ----------GUAGAUG-----------AUGGUUAGCCAUAGGGUACAAUCAACGGUCGAUGGUUUUGAU panTro2 ----------GUAGAUG-----------AUGGUUAGCCAUAGGGUACAAUCAACGGUCGAUGGUUUUGAU ponAbe2 ----------GUAGAUG-----------AUGGUUAGCCAUAGGGUACAAUCAACGGUCGAUGGUUUUGAU rheMac2 ----------GUAGAUG-----------AUGGUUAGCCAUAGGGUACAAUCAACGGUCGAUGGUUUUGAU calJac1 ----------GUAGAUG-----------AUGGUUAGCCAUAGGGUACAAUCAACGGUCGAUGGUUUUGAU micMur1 ------------------------------------CCAUAGGGUACAAUCAACGGUCGAUGGUUUUGAU tarSyr1 ----------GUAGUUG-----------AUGGUUAGCCAUAGGGUACAAUCAACGGUCGAUGGUUUUGAU otoGar1 ----------GUAGAUG-----------AUGGUUAGCCAUAGGGUACAAUCAACGGUCGAUGGUUUUGAU tupBel1 ----------GGAGAUG-----------AUGGUUAGCCAUAGGGUACAAUCAACGGUCGAUGGUUUUGAU mm9 ----------GUAGAUG-----------AUGGUUAGCUAUAGGGUACAAUCAACGGUCGAUGGUUUUUAU rn4 ----------GUAGAUA-----------AUGGUUAGCUAUAGGGUACAAUCAACGGUCGAUGGUUUUUAU dipOrd1 ----------GUAGAUG-----------CUGGGUAGCCAUAGGGUACAAUCAACGGUCGAUGGUUUUGAU cavPor3 ----------GUAGAUG-----------AUGGUUGGCCAUAGGGUACAAUCAACGGUCGAUGGUUUUGAU speTri1 ----------GCAGUUG-----------AUGGUUAGCCAUAGGGUACAAUCAACGGUCGAUGGUUUUGAU oryCun1 ----------GUAGAUG-----------AUGGUUAGCCAUAGGGUACAAUCAACGGUCGAUGGUUUUGAU ochPri2 ----------GCAGAUC-----------AUGGUUAGCCAUAGGGUACAAUCAACGGUCGAUGGUUUUGAU vicPac1 ----------GGCGGUG-----------GUGGUUGGCCAUAGGGUACAAUCAACGGUCGAUGGUUUUGAU turTru1 ----------GGAGAUG-----------GUGGUUGGCCAUAGGGUACAAUCAACGGUCGAUGGUUUUGAU bosTau4 ----------GGAGAUG-----------GUGGUUGGCCAUAGGGUACAAUCAACGGUCGAUGGUUUUGAU equCab2 ----------GGAGAGG-----------AUGGCUAGCCACAGGGCACAAUCAACGGUCGAUGGUUUUGAU felCat3 ----------GUAGAUG-----------AUGGUUAGCCAUAGGGUACAAUCAACGGUCGAUGGUUUUGAU canFam2 ----------GUAGAUG-----------AUGGUUAGCUAUAGGGUACAAUCAACGGUCGAUGGUUUUGAU myoLuc1 ----------gcagguG-----------AUGGUUAGCCAUAGGGUACAAUCAACGGUCGAUGGUUUUGAC pteVam1 ----------GUGGGUG-----------ACGGUUAGCCAUAGGGUACAAUCAACGGUCGAUGGUUUUGAC eriEur1 ----------GUAGAUG-----------AUGGGUAGCCAUAGGGUACAAUCAACGGUCGAUGGUUUUGAU sorAra1 ----------GUAGAGG-----------AUUGGUAGCCUUAGGGUACAAUCAACGGUCGAUGGUUUUGAU proCap1 ----------GUAGACG-----------AUGGUUAGCCAUAGGGUACAAUCAACGGUCGAUGGUUUUGAU echTel1 ----------GCAGAUA-----------AGGGUUAGCCACAGGGUACAUUCAACGGUCAAUGGUUUGUGC dasNov2 ----------GUAGAUG-----------ACGGUUAGCCAUAGGGUACAAUCAACGGUCGAUGGUUUUGAU choHof1 ----------GUAGAUG-----------AUGGUUAGCCAUAGGGUACAAUCAACGGUCGAUGGUUUUGAU monDom4 GGAAG-A-AGGAUGAUG-----------GUGGUUAGCUGUAGGGUACAAUCAACGGUCGAUGGUUUUCAU ornAna1 GAAAG-----GAGGACG-----------GUGGUU-GCCGCAGGGUACAAUCAACGGUCGAUGGUUUCUAC taeGut1 GUAAG-----GAGGAGG-----------AUGGUUAGCUGGAGGGUACAAUCAACGGUCGAUGGUUUUCAC galGal3 GUAAG-----GAGGAGG-----------AUGGUUAGCUGGAGGGUACAAUCAACGGUCGAUGGUUUUCAC anoCar1 ggaag-----gaggagg-----------auggUUAGCUGGAGGGUACAAUCAACGGUCGAUGGUUUUCAC tetNig1 ----------GGAGAUGCUAGGUGAUAAAAUGCCGGCCACGGGGUACAAUCAACGGUCGAUGGUUUUUCC fr2 ----------GGAGAUGCUAAGUGAUAAAAUGCCGGCCACGGGGUACAAUCAACGGUcgaugguuuuucc gasAcu1 GGAGACAGCGAGUGAAA-----------GUGGCUCUCCACAGGGUACAAUCAACGGUCGAUGGUUUUCCC oryLat2 uGGGACACCGGAUGACA-----------AGGACUGGCCACAGGGUACAGUCAACGGUCGAUGGUUUUCUU danRer5 AGAAGCGAGGCUCGGUA-----------GGGCUCGGCCGCAGGGUACAAUCAACGGUCGAUGGUUUUUUU SS anno ..............................((((.(((.(((.(.(((.((((((((((.((((((.((. pair symbol abcd efg hij k lmn opqrstuvwx yzABCD EF offset 7 8 9 0 1 FR086231 --U-UU-AA-UUCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAC-C panTro2 --U-UU-AA-UUCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAC-C ponAbe2 --U-UU-AA-UUCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAC-C rheMac2 --U-UU-AA-UUCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAC-C calJac1 --U-UU-AA-UUCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAC-C micMur1 --U-UU-AA-UUCCAAACUCACCGACAGCG-UGAAUGUUCACUGAAGCAAC-C tarSyr1 --U-UU-AA-UUCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAC-C otoGar1 --U-UU-AA-UUCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAC-C tupBel1 --U-AU-AA-UUCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAC-C mm9 --U-UG-AA-UUCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAC-C rn4 --U-UG-AA-UUCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAC-C dipOrd1 --U-UU-AA-UUCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAC-C cavPor3 --U-UU-AA-UUCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAC-C speTri1 --U-UU-AA-UUCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAC-C oryCun1 --U-UU-AA-UUCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAC-C ochPri2 --U-UU-AA-UUUCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAC-C vicPac1 --U-UUAAA-UUCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAC-C turTru1 --U-UU-AA-UUCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAC-C bosTau4 --UUUU-AA-UUCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAC-C equCab2 --U-UU-AA-UUCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAC-C felCat3 --U-UU-AA-UUCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAC-C canFam2 --U-UU-AA-UUCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAC-C myoLuc1 --U-UU-AA-UUCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAACC pteVam1 --U-UU-AA-UUCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAC-C eriEur1 --U-UU-AA-UUCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCGAC-C sorAra1 --U-UU-AA-UUCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAC-C proCap1 --U-UU-AA-UCCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAC-C echTel1 --U-----A-U--UCAACUCACCGACAGCGUUG-AUGUUCACUGA-------- dasNov2 --U-UU-AA-UUCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAC-C choHof1 --U-UU-AA-UUCCAAACUCACCGACAGCGUUGAAUGUUCUCUGAAGCAAC-C monDom4 --U-UU-AA-UUCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAC-C ornAna1 --U-UU-AA-UUCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAC-C taeGut1 --U-UU-AA-UUCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAC-C galGal3 --U-UA-AA-UUCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAC-C anoCar1 --U-UU-AA-UCCCAAACUCACCGACAGCGUUGAAUGUUCACUGAAGCAAC-C tetNig1 -AA-UU-UG-GCUCAAACUCACCGACAGCGUUGAAUGUUCACCGGGGCGAG-C fr2 -aa-uu-ua-gcUCAAACUCACCGACAGCGUUGAAUGUUCACCGGGGCGAG-C gasAcu1 --A-AC-AUGGCAGAAACUCACCGACAGCGUUGAAUGUUCACUGGGGCGAG-C oryLat2 CAA-UU-UA-GCUCAAACUCACCGACAGCGUUGAAUGUUCACCGGGGCAAG-A danRer5 CCA-UU-UA-GCUCAAACUCACCGACAGCGUUGAAUGUUCACUGAGGCAAA-C SS anno ...........)).)))).)).))))..)))))).))).).))).)))))).) pair symbol FE DCBA zy xwvu tsrqpo nml k jih gfedcb a