FR180438

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  • Summary
  • Sequence
  • Secondary Structure
Evidence Mapping [blat]
blat with identity=99, coverage=90 and no-repeat
Evidence Sequence Similarity [highly similar]
Almost same sequences with one mismatch or one gap
Summary
ID FR180438
Description tyrosine kinase B (TrkB) internal ribosome entry site (IRES)
Accession BC031835
Sequence Ontology internal_ribosome_entry_site
Organism
Homo sapiens human , man
Genome Mapping
human(hg18)           1 region chr9:86475131-86475483(+) 
Cross Reference
Rfam v8.1 RF00547
Gene Association / Sense Overlap / 5'UTR
human(hg18) NTRK2 (uc004anv.1 , uc004anw.1 , uc004anx.1 , uc004any.1 , uc004anz.1 , uc004aoa.1 , uc004aob.1 )
Gene Association / Sense Overlap / Exon
human(hg18) NTRK2 (uc004anv.1 , uc004anw.1 , uc004anx.1 , uc004any.1 , uc004anz.1 , uc004aoa.1 , uc004aob.1 )
Sequence Similarity
highly similar FR259984   tyrosine kinase B (TrkB) internal ribosome entry site (IRES)

OMIM
IDTitleLocus
600456  NEUROTROPHIC TYROSINE KINASE, RECEPTOR, TYPE 2; NTRK2
TYROSINE KINASE RECEPTOR B; TRKB OBESITY, HYPERPHAGIA, AND DEVELOPMENTAL DELAY, INCLUDED
9q22.1(chr9:89600001-91000000)

Reference
Internal initiation of translation of the TrkB mRNA is mediated by multiple regions within the 5' leader.
Dobson T.,Minic A.,Nielsen K.,Amiott E. and Krushel L.
Nucleic Acids Res 33 (9), 2929-41 (2005)

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