FR217284

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  • Summary
  • Sequence
  • Secondary Structure
Evidence Mapping [EvoFold]
extracted from EvoFold track on Genome Browser@hg18
Summary
ID FR217284
Description Putative conserved noncoding region (EvoFold)
Accession
Sequence Ontology nc_conserved_region
Organism
Homo sapiens human , man
Genome Mapping
human(hg18)           1 region chr1:38282324-38282516(-) 
Cross Reference
RNAdb v2.0 EVF1924
Gene Association / Sense Overlap / 3'UTR
human(hg18) POU3F1 (uc001ccp.1 )
Sequence Similarity
  

OMIM
IDTitleLocus
602479  POU DOMAIN, CLASS 3, TRANSCRIPTION FACTOR 1; POU3F1
OCT6
SCIP
1p34.1(chr1:43900001-46500000)

MicroArray / Affymetrix GeneChip Exon Array / hg18
ProbeTranscript ClusterProbe Locus
2179805 2407496  chr1:38282345-38282369(-) 
1846380 2407496  chr1:38282442-38282466(-) 
691403 2407496  chr1:38282463-38282487(-) 

Reference
Identification and classification of conserved RNA secondary structures in the human genome.
Pedersen JS.,Bejerano G.,Siepel A.,Rosenbloom K.,Lindblad-Toh K.,Lander ES.,Kent J.,Miller W. and Haussler D.
PLoS Comput Biol 2 (4), e33 (2006)
RNAdb--a comprehensive mammalian noncoding RNA database.
Pang KC.,Stephen S.,Engström PG.,Tajul-Arifin K.,Chen W.,Wahlestedt C.,Lenhard B.,Hayashizaki Y. and Mattick JS.
Nucleic Acids Res 33 (Database issue), D125-30 (2005)

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