FR310315

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  • Summary
  • Sequence
  • Secondary Structure
Evidence Sequence Similarity [highly similar]
Almost same sequences with one mismatch or one gap
Summary
ID FR310315
Description transfer RNA (tRNA), CAC (Val/V) Valine
Accession AC008443 , AC008620 , AC034285 , AC093350 , AC115458 , AC121792 , AC146538 , AL121936 , AL590614 , AL592295 , AL645849 , AL714025 , BX000993 , BX469917 , BX927279 , BX927388 , CR361555 , K00254 , M15784 , M33940
Sequence Ontology tRNA
Organism
Danio rerio Brachidanio rerio , Brachydanio rerio , Cyprinus rerio , Cyprinus rerio Hamilton, 1822 , Danio rerio (Hamilton, 1822) , leopard danio , zebra danio , zebra fish , zebrafish
Gasterosteus aculeatus three spined stickleback
Homo sapiens human , man
Mus musculus LK3 transgenic mice , Mus muscaris , Mus sp. 129SV , house mouse , mice C57BL/6xCBA/CaJ hybrid , mouse , nude mice , transgenic mice
Rattus norvegicus Buffalo rat , Gunn rats , Norway rat , Rattus PC12 clone IS , Rattus norvegicus8 , Rattus norwegicus , Rattus rattiscus , Rattus sp. strain Wistar , Sprague-Dawley rat , Wistar rats , brown rat , laboratory rat , rat , rats , zitter rats
Genome Mapping
human(hg18)
(mapping suppressed due to excessive repeat)
mouse(mm9)
(mapping suppressed due to excessive repeat)
rat(rn3)
(mapping suppressed due to excessive repeat)
Cross Reference
Rfam v8.1 RF00005
Sequence Similarity
highly similar FR014551   transfer RNA (tRNA), CAC (Val/V) Valine
FR187521   transfer RNA (tRNA), CAC (Val/V) Valine
FR204715   transfer RNA (tRNA), AAC (Val/V) Valine
FR233775   transfer RNA (tRNA), GAC (Val/V) Valine
FR279765   transfer RNA (tRNA), CAC (Val/V) Valine
FR312291   transfer RNA (tRNA), NAC (Val/V) Valine
FR401032   transfer RNA (tRNA), CAC (Val/V) Valine

Reference
tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.
Lowe TM. and Eddy SR.
Nucleic Acids Res 25 (5), 955-64 (1997)
The tertiary structure of tRNA and the development of the genetic code.
Hou YM.
Trends Biochem Sci 18 (10), 362-4 (1993)

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