FR318213
- Summary
- Sequence
- Secondary Structure
| Summary | |
|---|---|
| ID | FR318213 |
| Description | Piwi-interacting RNA (piRNA) |
| Accession | DQ597461 |
| Sequence Ontology | piRNA |
| Organism | |
| Genome Mapping | |
| human(hg18) 12 regions | chr15:100111115-100111142(+)  |
| chr15:100111459-100111486(+) |
|
| chr15:100113807-100113834(+) |
|
| chr15:100115814-100115841(+) |
|
| chr15:100116250-100116277(+) |
|
| chr15:100116685-100116712(+) |
|
| chr15:100118075-100118102(+) |
|
| chr15:100119127-100119154(+) |
|
| chr15:100119562-100119589(+) |
|
| chr15:100120458-100120485(+) |
|
| chr15:100121510-100121537(+) |
|
| chr15:100122289-100122316(+) |
|
| Cross Reference | |
| Sequence Similarity | |
| highly similar |
FR390512 Piwi-interacting RNA (piRNA) |
| Reference | |
|---|---|
|
A germline-specific class of small RNAs binds mammalian Piwi proteins.
Girard A.,Sachidanandam R.,Hannon GJ. and Carmell MA. Nature 442 (7099), 199-202 (2006)
RNAdb--a comprehensive mammalian noncoding RNA database.
Pang KC.,Stephen S.,Engström PG.,Tajul-Arifin K.,Chen W.,Wahlestedt C.,Lenhard B.,Hayashizaki Y. and Mattick JS. Nucleic Acids Res 33 (Database issue), D125-30 (2005) | |
A germline-specific class of small RNAs binds mammalian Piwi proteins.
Girard A.,Sachidanandam R.,Hannon GJ. and Carmell MA.
Nature 442 (7099), 199-202 (2006)
Girard A.,Sachidanandam R.,Hannon GJ. and Carmell MA.
Nature 442 (7099), 199-202 (2006)
RNAdb--a comprehensive mammalian noncoding RNA database.
Pang KC.,Stephen S.,Engström PG.,Tajul-Arifin K.,Chen W.,Wahlestedt C.,Lenhard B.,Hayashizaki Y. and Mattick JS.
Nucleic Acids Res 33 (Database issue), D125-30 (2005)
Pang KC.,Stephen S.,Engström PG.,Tajul-Arifin K.,Chen W.,Wahlestedt C.,Lenhard B.,Hayashizaki Y. and Mattick JS.
Nucleic Acids Res 33 (Database issue), D125-30 (2005)
>FR318213|DQ597461|Piwi-interacting RNA (piRNA)|piRNA|PIR58572 RNAdb v2.0|Homo sapiens|28nt GCGGCGTGACGAGACTCGCGTGGGAAGA
Evidence : putative(CentroidFold)
Evidence Secondary Structure [putative(CentroidFold)]
Putative secondary structure predicted by CentroidFold(-g=4).
0 1 2 GCGGCGUGACGAGACUCGCGUGGGAAGA ...((((((......)))))).......
| Experiment | Method | Tissue | Read Number | PubMed |
|---|