FR320166

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  • Summary
  • Sequence
  • Secondary Structure
Evidence Mapping [blat]
blat with identity=99, coverage=90 and no-repeat
Evidence Sequence Similarity [highly similar]
Almost same sequences with one mismatch or one gap
Summary
ID FR320166
Description C/D box guide small nucleolar RNA (snoRNA) HBII-52 / SNORD116
Accession AC009696 , AC124312 , AF241255
Sequence Ontology C_D_box_snoRNA
Organism
Homo sapiens human , man
Genome Mapping
human(hg18)           1 region chr15:22883902-22883993(+) 
Cross Reference
Rfam v8.1 RF00108
Gene Association / Sense Overlap / Intron
human(hg18) DKFZp686M12165 (uc001yxh.1 , uc001yxm.1 , uc001yxn.2 , uc001yxy.2 , uc001yyb.2 , uc001yyd.2 )
Gene Association / Sense Overlap / 3'UTR
human(hg18) NR_003335 (uc001yyf.1 )
Sequence Similarity
highly similar FR083178   C/D box guide small nucleolar RNA (snoRNA) HBII-52 / SNORD116
FR325019   C/D box guide small nucleolar RNA (snoRNA) HBII-52 / SNORD116

MicroArray / Affymetrix GeneChip Exon Array / hg18
ProbeTranscript ClusterProbe Locus
1755600 3584443  chr15:22883958-22883982(+) 
1294495 3584443  chr15:22883963-22883987(+) 
1292143 3584443  chr15:22883966-22883990(+) 
1888575 3584443  chr15:22883969-22883993(+) 

Reference
Identification of brain-specific and imprinted small nucleolar RNA genes exhibiting an unusual genomic organization.
Cavaillé J.,Buiting K.,Kiefmann M.,Lalande M.,Brannan CI.,Horsthemke B.,Bachellerie JP.,Brosius J. and Hüttenhofer A.
Proc Natl Acad Sci U S A 97 (26), 14311-6 (2000)

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