FR356277

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  • Summary
  • Sequence
  • Secondary Structure
Evidence Mapping [blat]
blat with identity=99, coverage=90 and no-repeat
Summary
ID FR356277
Description C/D box guide small nucleolar RNA (snoRNA) HBII-419 / SNORD98
Accession AL513534
Sequence Ontology C_D_box_snoRNA
Organism
Homo sapiens human , man
Genome Mapping
human(hg18)           1 region chr10:70184935-70185001(+) 
Cross Reference
Rfam v8.1 RF00607
snoRNA-LBME-db release3 HBII-419
RNAdb v2.0 SNO1289
Gene Association / Sense Overlap / Intron
human(hg18) CCAR1 (uc001jol.1 , uc001jom.1 , uc001jon.1 , uc001joo.1 , uc009xpx.1 )
Gene Association / Sense Overlap / 3'UTR
human(hg18) NR_003076 (uc001jop.1 )
Sequence Similarity
  

OMIM
IDTitleLocus
612569  CELL DIVISION CYCLE AND APOPTOSIS REGULATOR 1; CCAR1
CELL CYCLE AND APOPTOSIS REGULATORY PROTEIN 1; CARP1
 10q21.3(chr10:64800001-71300000)

MicroArray / Invitrogen Ncode Noncoding RNA Array / hg18
ProbeTarget TranscriptProbe Locus
IVGNh26578 UC001JOP  chr10:70184934-70184994(+) 

Reference
snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs.
Lestrade L. and Weber MJ.
Nucleic Acids Res 34 (Database issue), D158-62 (2006)
RNAdb--a comprehensive mammalian noncoding RNA database.
Pang KC.,Stephen S.,Engström PG.,Tajul-Arifin K.,Chen W.,Wahlestedt C.,Lenhard B.,Hayashizaki Y. and Mattick JS.
Nucleic Acids Res 33 (Database issue), D125-30 (2005)
Purified box C/D snoRNPs are able to reproduce site-specific 2'-O-methylation of target RNA in vitro.
Galardi S.,Fatica A.,Bachi A.,Scaloni A.,Presutti C. and Bozzoni I.
Mol Cell Biol 22 (19), 6663-8 (2002)
RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse.
Hüttenhofer A.,Kiefmann M.,Meier-Ewert S.,O'Brien J.,Lehrach H.,Bachellerie JP. and Brosius J.
EMBO J 20 (11), 2943-53 (2001)
The numerous modified nucleotides in eukaryotic ribosomal RNA.
Maden BE.
Prog Nucleic Acid Res Mol Biol 39 (), 241-303 (1990)

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