FR375160

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  • Summary
  • Sequence
  • Secondary Structure
Evidence Mapping [seqmap]
seqmap with no-mismatch, no-gap and no-repeat
Evidence Mapping [seqmap]
seqmap with no-mismatch, no-gap and no-repeat
Evidence Mapping [seqmap]
seqmap with no-mismatch, no-gap and no-repeat
Evidence Mapping [seqmap]
seqmap with no-mismatch, no-gap and no-repeat
Evidence Sequence Similarity [highly similar]
Almost same sequences with one mismatch or one gap
Summary
ID FR375160
Description Histone 3' untraslated region (UTR) stem-loop
Accession AF397301 , AF531283 , AF531284 , AF531291 , AL031777 , AL512384 , AP001803 , BC096116 , BC096117 , BC096118 , BC096119 , Z80781 , Z83737 , Z98744
Sequence Ontology three_prime_UTR
Organism
Homo sapiens human , man
Genome Mapping
human(hg18)           4 regions chr6:25835527-25835552(+) 
chr6:26360257-26360282(+) 
chr6:27966072-27966097(-) 
chr11:56279989-56280014(+) 
Cross Reference
Rfam v8.1 RF00032
Sequence Similarity
highly similar FR028070   Histone 3' untraslated region (UTR) stem-loop
FR087493   Histone 3' untraslated region (UTR) stem-loop

OMIM
IDTitleLocus
609904  HISTONE 1, H2BA; HIST1H2BA
TESTIS-SPECIFIC HISTONE H2B; TSH2B
6p22.2(chr6:23500001-26100000)
602806  HISTONE 1, H2BH; HIST1H2BH
H2B HISTONE FAMILY, MEMBER J; H2BFJ
H2B/J
6p21.3(chr6:29900001-36800000)
602817  HISTONE 1, H3J; HIST1H3J
H3 HISTONE FAMILY, MEMBER J; H3FJ
H3/J
6p22-p21.3(chr6:15500001-36800000)

Reference
Formation of the 3' end of histone mRNA.
Dominski Z. and Marzluff WF.
Gene 239 (1), 1-14 (1999)
The sequence of the stem and flanking sequences at the 3' end of histone mRNA are critical determinants for the binding of the stem-loop binding protein.
Williams AS. and Marzluff WF.
Nucleic Acids Res 23 (4), 654-62 (1995)

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