FR391398
- Summary
- Sequence
- Secondary Structure
| Summary | |
|---|---|
| ID | FR391398 |
| Description | non-protein coding (noncoding) transcript |
| Accession | X56198 |
| Sequence Ontology | ncRNA |
| Organism | |
| Genome Mapping | |
| human(hg18) 1 region | chrX:72961183-72961351(-) |
| Cross Reference | |
| Gene Association / Sense Overlap / 5'UTR | |
| human(hg18) | NR_001564 (uc004ebm.1 ) |
| Gene Association / AntiSense Overlap / 3'UTR | |
| human(hg18) | NR_003255 (uc004ebn.2 ) |
| Sequence Similarity | |
| OMIM | ||
|---|---|---|
| ID | Title | Locus |
| 300310 | AGAMMAGLOBULINEMIA, X-LINKED, TYPE 2; AGMX2 XLA2 |
Xp22(chrX:1-24900000) |
| 304050 | AICARDI SYNDROME; AIC CORPUS CALLOSUM, AGENESIS OF, WITH CHORIORETINAL ABNORMALITY |
Xp22(chrX:1-24900000) |
| 302801 | CHARCOT-MARIE-TOOTH DISEASE, X-LINKED RECESSIVE, 2; CMTX2 CHARCOT-MARIE-TOOTH NEUROPATHY, X-LINKED RECESSIVE, 2 |
Xp22.2(chrX:9500001-17100000) |
| 300066 | DEAFNESS, X-LINKED 4; DFNX4 DEAFNESS, X-LINKED 6, PROGRESSIVE; DFN6
DEAFNESS, NONSYNDROMIC SENSORINEURAL PROGRESSIVE 6 |
Xp22(chrX:1-24900000) |
| 300211 | EPISODIC MUSCLE WEAKNESS, X-LINKED; EMWX | Xp22.3(chrX:1-9500000) |
| 305435 | FETAL HEMOGLOBIN QUANTITATIVE TRAIT LOCUS 3; HBFQTL3 F-CELL PRODUCTION, X-LINKED; FCPX HETEROCELLULAR HEREDITARY PERSISTENCE OF FETAL HEMOGLOBIN, SWISS TYPE, INCLUDED
HPFH, SWISS TYPE, INCLUDED |
Xp22.2(chrX:9500001-17100000) |
| 300406 | FG SYNDROME 3; FGS3 | Xp22.3(chrX:1-9500000) |
| 300273 | GOITER, MULTINODULAR 2; MNG2 | Xp22(chrX:1-24900000) |
| 300221 | HODGKIN DISEASE, X-LINKED PSEUDOAUTOSOMAL | Xpter-p22.32(chrX:1-6000000) |
| 426000 | LYSINE-SPECIFIC DEMETHYLASE 5D; KDM5D JUMONJI, AT-RICH INTERACTIVE DOMAIN 1D; JARID1D
SELECTED cDNA ON Y, MOUSE, HOMOLOG OF; SMCY
HISTOCOMPATIBILITY Y ANTIGEN; HY; HYA
H-Y ANTIGEN |
Yq11(chrY:11300001-27200000) |
| 300428 | MENTAL RETARDATION, X-LINKED 2; MRX2 | Xp22.3(chrX:1-9500000) |
| 310465 | N SYNDROME; NSX | Xp22.3-p21.1(chrX:1-37500000) |
| 301220 | PIGMENTARY DISORDER, RETICULATE, WITH SYSTEMIC MANIFESTATIONS; PDR AMYLOIDOSIS, FAMILIAL CUTANEOUS |
Xp22-p21(chrX:1-37500000) |
| 300424 | RETINITIS PIGMENTOSA 23; RP23 | Xp22(chrX:1-24900000) |
| 300209 | SIMPSON-GOLABI-BEHMEL SYNDROME, TYPE 2 SGBS2 |
Xp22(chrX:1-24900000) |
| 313000 | SPATIAL VISUALIZATION, APTITUDE FOR VISUOSPATIAL/PERCEPTUAL ABILITIES; VSPA TURNER SYNDROME-ASSOCIATED NEUROCOGNITIVE PHENOTYPE, INCLUDED |
Xp22.33(chrX:1-4300000) |
| 300421 | WITTWER SYNDROME WTRS |
|
| 300181 | X INACTIVATION-SPECIFIC TRANSCRIPT-ANTISENSE; TSIX XIST-ANTISENSE |
Xq13.2(chrX:72200001-73800000) |
| 314670 | X INACTIVATION-SPECIFIC TRANSCRIPT; XIST X INACTIVATION CENTER, INCLUDED; XIC, INCLUDED | Xq13.2(chrX:72200001-73800000) |
| MicroArray / Affymetrix GeneChip Exon Array / hg18 | ||
|---|---|---|
| Probe | Transcript Cluster | Probe Locus |
| 5643624 | 4012572 ![]() |
chrX:72961250-72961274(-) ![]() |
| 1241470 | 4012572 ![]() |
chrX:72961272-72961296(-) ![]() |
| Reference | |
|---|---|
|
The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts.
Genome Information Integration Project And H-Invitational 2 .,Yamasaki C.,Murakami K.,Fujii Y.,Sato Y.,Harada E.,Takeda J.,Taniya T.,Sakate R.,Kikugawa S.,Shimada M.,Tanino M.,Koyanagi KO.,Barrero RA.,Gough C.,Chun HW.,Habara T.,Hanaoka H.,Hayakawa Y.,Hilton PB.,Kaneko Y.,Kanno M.,Kawahara Y.,Kawamura T.,Matsuya A.,Nagata N.,Nishikata K.,Noda AO.,Nurimoto S.,Saichi N.,Sakai H.,Sanbonmatsu R.,Shiba R.,Suzuki M.,Takabayashi K.,Takahashi A.,Tamura T.,Tanaka M.,Tanaka S.,Todokoro F.,Yamaguchi K.,Yamamoto N.,Okido T.,Mashima J.,Hashizume A.,Jin L.,Lee KB.,Lin YC.,Nozaki A.,Sakai K.,Tada M.,Miyazaki S.,Makino T.,Ohyanagi H.,Osato N.,Tanaka N.,Suzuki Y.,Ikeo K.,Saitou N.,Sugawara H.,O'Donovan C.,Kulikova T.,Whitfield E.,Halligan B.,Shimoyama M.,Twigger S.,Yura K.,Kimura K.,Yasuda T.,Nishikawa T.,Akiyama Y.,Motono C.,Mukai Y.,Nagasaki H.,Suwa M.,Horton P.,Kikuno R.,Ohara O.,Lancet D.,Eveno E.,Graudens E.,Imbeaud S.,Debily MA.,Hayashizaki Y.,Amid C.,Han M.,Osanger A.,Endo T.,Thomas MA.,Hirakawa M.,Makalowski W.,Nakao M.,Kim NS.,Yoo HS.,De Souza SJ.,Bonaldo Mde F.,Niimura Y.,Kuryshev V.,Schupp I.,Wiemann S.,Bellgard M.,Shionyu M.,Jia L.,Thierry-Mieg D.,Thierry-Mieg J.,Wagner L.,Zhang Q.,Go M.,Minoshima S.,Ohtsubo M.,Hanada K.,Tonellato P.,Isogai T.,Zhang J.,Lenhard B.,Kim S.,Chen Z.,Hinz U.,Estreicher A.,Nakai K.,Makalowska I.,Hide W.,Tiffin N.,Wilming L.,Chakraborty R.,Soares MB.,Chiusano ML.,Suzuki Y.,Auffray C.,Yamaguchi-Kabata Y.,Itoh T.,Hishiki T.,Fukuchi S.,Nishikawa K.,Sugano S.,Nomura N.,Tateno Y.,Imanishi T. and Gojobori T. Nucleic Acids Res 36 (Database issue), D793-9 (2008)
RNAdb--a comprehensive mammalian noncoding RNA database.
Pang KC.,Stephen S.,Engström PG.,Tajul-Arifin K.,Chen W.,Wahlestedt C.,Lenhard B.,Hayashizaki Y. and Mattick JS. Nucleic Acids Res 33 (Database issue), D125-30 (2005)
Integrative annotation of 21,037 human genes validated by full-length cDNA clones.
Imanishi T.,Itoh T.,Suzuki Y.,O'Donovan C.,Fukuchi S.,Koyanagi KO.,Barrero RA.,Tamura T.,Yamaguchi-Kabata Y.,Tanino M.,Yura K.,Miyazaki S.,Ikeo K.,Homma K.,Kasprzyk A.,Nishikawa T.,Hirakawa M.,Thierry-Mieg J.,Thierry-Mieg D.,Ashurst J.,Jia L.,Nakao M.,Thomas MA.,Mulder N.,Karavidopoulou Y.,Jin L.,Kim S.,Yasuda T.,Lenhard B.,Eveno E.,Suzuki Y.,Yamasaki C.,Takeda J.,Gough C.,Hilton P.,Fujii Y.,Sakai H.,Tanaka S.,Amid C.,Bellgard M.,Bonaldo Mde F.,Bono H.,Bromberg SK.,Brookes AJ.,Bruford E.,Carninci P.,Chelala C.,Couillault C.,de Souza SJ.,Debily MA.,Devignes MD.,Dubchak I.,Endo T.,Estreicher A.,Eyras E.,Fukami-Kobayashi K.,Gopinath GR.,Graudens E.,Hahn Y.,Han M.,Han ZG.,Hanada K.,Hanaoka H.,Harada E.,Hashimoto K.,Hinz U.,Hirai M.,Hishiki T.,Hopkinson I.,Imbeaud S.,Inoko H.,Kanapin A.,Kaneko Y.,Kasukawa T.,Kelso J.,Kersey P.,Kikuno R.,Kimura K.,Korn B.,Kuryshev V.,Makalowska I.,Makino T.,Mano S.,Mariage-Samson R.,Mashima J.,Matsuda H.,Mewes HW.,Minoshima S.,Nagai K.,Nagasaki H.,Nagata N.,Nigam R.,Ogasawara O.,Ohara O.,Ohtsubo M.,Okada N.,Okido T.,Oota S.,Ota M.,Ota T.,Otsuki T.,Piatier-Tonneau D.,Poustka A.,Ren SX.,Saitou N.,Sakai K.,Sakamoto S.,Sakate R.,Schupp I.,Servant F.,Sherry S.,Shiba R.,Shimizu N.,Shimoyama M.,Simpson AJ.,Soares B.,Steward C.,Suwa M.,Suzuki M.,Takahashi A.,Tamiya G.,Tanaka H.,Taylor T.,Terwilliger JD.,Unneberg P.,Veeramachaneni V.,Watanabe S.,Wilming L.,Yasuda N.,Yoo HS.,Stodolsky M.,Makalowski W.,Go M.,Nakai K.,Takagi T.,Kanehisa M.,Sakaki Y.,Quackenbush J.,Okazaki Y.,Hayashizaki Y.,Hide W.,Chakraborty R.,Nishikawa K.,Sugawara H.,Tateno Y.,Chen Z.,Oishi M.,Tonellato P.,Apweiler R.,Okubo K.,Wagner L.,Wiemann S.,Strausberg RL.,Isogai T.,Auffray C.,Nomura N.,Gojobori T. and Sugano S. PLoS Biol 2 (6), e162 (2004) | |
