FR407485

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  • Summary
  • Sequence
  • Secondary Structure
Evidence Mapping [H-invitational v6.0]
extracted from H-invitational v6.0
Summary
ID FR407485
Description non-protein coding (noncoding) transcript
Accession EF100444
Sequence Ontology ncRNA
Organism
Homo sapiens human , man
Genome Mapping
human(hg18)           1 region chr6:144305454-144427341(-) 
Cross Reference
H-invitational v5.0 HIT000394859
Gene Association / Sense Overlap / 5'UTR
human(hg18) NR_002768 (uc003qkq.1 ), PLAGL1 (uc003qjv.1 , uc003qjw.1 , uc003qjx.1 , uc003qjy.1 , uc003qjz.1 , uc003qka.1 , uc003qkb.1 , uc003qkc.1 , uc003qkd.1 , uc003qke.1 , uc003qkf.1 , uc003qkg.1 , uc003qkh.1 , uc003qki.1 , uc003qkj.1 , uc003qkk.1 , uc003qkl.1 , uc003qkm.1 , uc003qkn.1 , uc003qko.1 , uc003qkp.1 , uc010khl.1 , uc010khm.1 , uc010khn.1 )
Gene Association / Sense Overlap / Exon
human(hg18) PLAGL1 (uc003qjv.1 , uc003qjw.1 , uc003qjx.1 , uc003qjy.1 , uc003qjz.1 , uc003qka.1 , uc003qkb.1 , uc003qkc.1 , uc003qkd.1 , uc003qke.1 , uc003qkf.1 , uc003qkg.1 , uc003qkh.1 , uc003qki.1 , uc003qkj.1 , uc003qkk.1 , uc003qkl.1 , uc003qkm.1 , uc003qkn.1 , uc003qko.1 , uc003qkp.1 , uc010khl.1 , uc010khm.1 , uc010khn.1 , uc010kho.1 )
Gene Association / Sense Overlap / Intron
human(hg18) NR_002768 (uc003qkq.1 ), PLAGL1 (uc003qjv.1 , uc003qjw.1 , uc003qjx.1 , uc003qjy.1 , uc003qjz.1 , uc003qka.1 , uc003qkb.1 , uc003qkc.1 , uc003qkd.1 , uc003qke.1 , uc003qkf.1 , uc003qkg.1 , uc003qkh.1 , uc003qki.1 , uc003qkj.1 , uc003qkk.1 , uc003qkl.1 , uc003qkm.1 , uc003qkn.1 , uc003qko.1 , uc003qkp.1 , uc010khl.1 , uc010khm.1 , uc010khn.1 )
Sequence Similarity
  

OMIM
IDTitleLocus
603044  PLEOMORPHIC ADENOMA GENE-LIKE 1; PLAGL1
ZAC TUMOR SUPPRESSOR GENE; ZAC
ZAC1
LOST ON TRANSFORMATION 1; LOT1
6q24(chr6:139100001-149100000)

MicroArray / Affymetrix GeneChip Exon Array / hg18
ProbeTranscript ClusterProbe Locus
3131043 2977621  chr6:144306866-144306890(-) 

Reference
The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts.
Genome Information Integration Project And H-Invitational 2 .,Yamasaki C.,Murakami K.,Fujii Y.,Sato Y.,Harada E.,Takeda J.,Taniya T.,Sakate R.,Kikugawa S.,Shimada M.,Tanino M.,Koyanagi KO.,Barrero RA.,Gough C.,Chun HW.,Habara T.,Hanaoka H.,Hayakawa Y.,Hilton PB.,Kaneko Y.,Kanno M.,Kawahara Y.,Kawamura T.,Matsuya A.,Nagata N.,Nishikata K.,Noda AO.,Nurimoto S.,Saichi N.,Sakai H.,Sanbonmatsu R.,Shiba R.,Suzuki M.,Takabayashi K.,Takahashi A.,Tamura T.,Tanaka M.,Tanaka S.,Todokoro F.,Yamaguchi K.,Yamamoto N.,Okido T.,Mashima J.,Hashizume A.,Jin L.,Lee KB.,Lin YC.,Nozaki A.,Sakai K.,Tada M.,Miyazaki S.,Makino T.,Ohyanagi H.,Osato N.,Tanaka N.,Suzuki Y.,Ikeo K.,Saitou N.,Sugawara H.,O'Donovan C.,Kulikova T.,Whitfield E.,Halligan B.,Shimoyama M.,Twigger S.,Yura K.,Kimura K.,Yasuda T.,Nishikawa T.,Akiyama Y.,Motono C.,Mukai Y.,Nagasaki H.,Suwa M.,Horton P.,Kikuno R.,Ohara O.,Lancet D.,Eveno E.,Graudens E.,Imbeaud S.,Debily MA.,Hayashizaki Y.,Amid C.,Han M.,Osanger A.,Endo T.,Thomas MA.,Hirakawa M.,Makalowski W.,Nakao M.,Kim NS.,Yoo HS.,De Souza SJ.,Bonaldo Mde F.,Niimura Y.,Kuryshev V.,Schupp I.,Wiemann S.,Bellgard M.,Shionyu M.,Jia L.,Thierry-Mieg D.,Thierry-Mieg J.,Wagner L.,Zhang Q.,Go M.,Minoshima S.,Ohtsubo M.,Hanada K.,Tonellato P.,Isogai T.,Zhang J.,Lenhard B.,Kim S.,Chen Z.,Hinz U.,Estreicher A.,Nakai K.,Makalowska I.,Hide W.,Tiffin N.,Wilming L.,Chakraborty R.,Soares MB.,Chiusano ML.,Suzuki Y.,Auffray C.,Yamaguchi-Kabata Y.,Itoh T.,Hishiki T.,Fukuchi S.,Nishikawa K.,Sugano S.,Nomura N.,Tateno Y.,Imanishi T. and Gojobori T.
Nucleic Acids Res 36 (Database issue), D793-9 (2008)
Integrative annotation of 21,037 human genes validated by full-length cDNA clones.
Imanishi T.,Itoh T.,Suzuki Y.,O'Donovan C.,Fukuchi S.,Koyanagi KO.,Barrero RA.,Tamura T.,Yamaguchi-Kabata Y.,Tanino M.,Yura K.,Miyazaki S.,Ikeo K.,Homma K.,Kasprzyk A.,Nishikawa T.,Hirakawa M.,Thierry-Mieg J.,Thierry-Mieg D.,Ashurst J.,Jia L.,Nakao M.,Thomas MA.,Mulder N.,Karavidopoulou Y.,Jin L.,Kim S.,Yasuda T.,Lenhard B.,Eveno E.,Suzuki Y.,Yamasaki C.,Takeda J.,Gough C.,Hilton P.,Fujii Y.,Sakai H.,Tanaka S.,Amid C.,Bellgard M.,Bonaldo Mde F.,Bono H.,Bromberg SK.,Brookes AJ.,Bruford E.,Carninci P.,Chelala C.,Couillault C.,de Souza SJ.,Debily MA.,Devignes MD.,Dubchak I.,Endo T.,Estreicher A.,Eyras E.,Fukami-Kobayashi K.,Gopinath GR.,Graudens E.,Hahn Y.,Han M.,Han ZG.,Hanada K.,Hanaoka H.,Harada E.,Hashimoto K.,Hinz U.,Hirai M.,Hishiki T.,Hopkinson I.,Imbeaud S.,Inoko H.,Kanapin A.,Kaneko Y.,Kasukawa T.,Kelso J.,Kersey P.,Kikuno R.,Kimura K.,Korn B.,Kuryshev V.,Makalowska I.,Makino T.,Mano S.,Mariage-Samson R.,Mashima J.,Matsuda H.,Mewes HW.,Minoshima S.,Nagai K.,Nagasaki H.,Nagata N.,Nigam R.,Ogasawara O.,Ohara O.,Ohtsubo M.,Okada N.,Okido T.,Oota S.,Ota M.,Ota T.,Otsuki T.,Piatier-Tonneau D.,Poustka A.,Ren SX.,Saitou N.,Sakai K.,Sakamoto S.,Sakate R.,Schupp I.,Servant F.,Sherry S.,Shiba R.,Shimizu N.,Shimoyama M.,Simpson AJ.,Soares B.,Steward C.,Suwa M.,Suzuki M.,Takahashi A.,Tamiya G.,Tanaka H.,Taylor T.,Terwilliger JD.,Unneberg P.,Veeramachaneni V.,Watanabe S.,Wilming L.,Yasuda N.,Yoo HS.,Stodolsky M.,Makalowski W.,Go M.,Nakai K.,Takagi T.,Kanehisa M.,Sakaki Y.,Quackenbush J.,Okazaki Y.,Hayashizaki Y.,Hide W.,Chakraborty R.,Nishikawa K.,Sugawara H.,Tateno Y.,Chen Z.,Oishi M.,Tonellato P.,Apweiler R.,Okubo K.,Wagner L.,Wiemann S.,Strausberg RL.,Isogai T.,Auffray C.,Nomura N.,Gojobori T. and Sugano S.
PLoS Biol 2 (6), e162 (2004)

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