Schema for RNA-seq Lymph Node Sig - Burge Lab RNA-seq 32mer Reads from Lymph Node, Raw Signal
Database: hg19    Primary Table: burgeRnaSeqGemMapperAlignLymphNodeAllRawSignal    Row Count: 9,462,386
Format description: bed-like graphing data
fieldexampleSQL type description
bin 585smallint(5) unsigned Indexing field to speed chromosome range queries.
chrom chr1varchar(255) Reference sequence chromosome or scaffold
chromStart 14914int(10) unsigned Start position in chromosome
chromEnd 14923int(10) unsigned End position in chromosome
dataValue 0.0616482float data value for this range
Sample Rows
binchromchromStartchromEnddataValue
585chr114914149230.0616482
585chr114923149260.184945
585chr114926149340.308241
585chr114934149460.369889
585chr114946149550.308241
585chr114955149580.184945
585chr114958149660.0616482
585chr116071160730.0616482
585chr116073160750.123296
585chr116075160780.308241

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.