Schema for RNA-seq MB435 Sig - Burge Lab RNA-seq 32mer Reads from MB-435 Cell Line, Raw Signal
Database: hg19    Primary Table: burgeRnaSeqGemMapperAlignMB435AllRawSignal    Row Count: 8,613,574
Format description: bed-like graphing data
fieldexampleSQL type description
bin 585smallint(5) unsigned Indexing field to speed chromosome range queries.
chrom chr1varchar(255) Reference sequence chromosome or scaffold
chromStart 14920int(10) unsigned Start position in chromosome
chromEnd 14952int(10) unsigned End position in chromosome
dataValue 0.0803246float data value for this range
Sample Rows
binchromchromStartchromEnddataValue
585chr114920149520.0803246
585chr116075160800.0803246
585chr116080160850.160649
585chr116085160860.240974
585chr116086160910.321298
585chr116091161070.401623
585chr116107161120.321298
585chr116112161170.240974
585chr116117161180.160649
585chr116118161230.0803246

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.