Schema for RNA-seq Testes Sig - Burge Lab RNA-seq 32mer Reads from Testes, Raw Signal
Database: hg19    Primary Table: burgeRnaSeqGemMapperAlignTestesAllRawSignal    Row Count: 11,454,466
Format description: bed-like graphing data
fieldexampleSQL type description
bin 585smallint(5) unsigned Indexing field to speed chromosome range queries.
chrom chr1varchar(255) Reference sequence chromosome or scaffold
chromStart 10465int(10) unsigned Start position in chromosome
chromEnd 10467int(10) unsigned End position in chromosome
dataValue 0.0530319float data value for this range
Sample Rows
binchromchromStartchromEnddataValue
585chr110465104670.0530319
585chr110467104940.106064
585chr110494104960.159096
585chr110496104970.212128
585chr110497104990.159096
585chr110499105010.106064
585chr110501105260.159096
585chr110526105330.106064
585chr110533105600.0530319
585chr113959139910.0530319

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.