Schema for humanHprdP2P
Database: hg19    Primary Table: humanHprdP2P    Row Count: 19,597,437
Format description: Distance between two genes in expression space.
fieldexampleSQL type description
query uc002nxp.2varchar(255) Name of one gene
target uc002nxp.2varchar(255) Name of other gene
distance 0float Distance in expression space, always >= 0
Connected Tables and Joining Fields
      hg19.bioCycPathway.kgID (via humanHprdP2P.query)
      hg19.ccdsKgMap.geneId (via humanHprdP2P.query)
      hg19.ceBlastTab.query (via humanHprdP2P.query)
      hg19.dmBlastTab.query (via humanHprdP2P.query)
      hg19.drBlastTab.query (via humanHprdP2P.query)
      hg19.foldUtr3.name (via humanHprdP2P.query)
      hg19.foldUtr5.name (via humanHprdP2P.query)
      hg19.gnfAtlas2Distance.query (via humanHprdP2P.query)
      hg19.gnfAtlas2Distance.target (via humanHprdP2P.query)
      hg19.humanVidalP2P.query (via humanHprdP2P.query)
      hg19.humanVidalP2P.target (via humanHprdP2P.query)
      hg19.humanWankerP2P.query (via humanHprdP2P.query)
      hg19.humanWankerP2P.target (via humanHprdP2P.query)
      hg19.keggPathway.kgID (via humanHprdP2P.query)
      hg19.kg4ToKg5.newId (via humanHprdP2P.query)
      hg19.kgAlias.kgID (via humanHprdP2P.query)
      hg19.kgColor.kgID (via humanHprdP2P.query)
      hg19.kgProtAlias.kgID (via humanHprdP2P.query)
      hg19.kgProtMap2.qName (via humanHprdP2P.query)
      hg19.kgSpAlias.kgID (via humanHprdP2P.query)
      hg19.kgTargetAli.qName (via humanHprdP2P.query)
      hg19.kgTxInfo.name (via humanHprdP2P.query)
      hg19.kgXref.kgID (via humanHprdP2P.query)
      hg19.knownBlastTab.query (via humanHprdP2P.query)
      hg19.knownBlastTab.target (via humanHprdP2P.query)
      hg19.knownCanonical.protein (via humanHprdP2P.query)
      hg19.knownCanonical.transcript (via humanHprdP2P.query)
      hg19.knownGene.name (via humanHprdP2P.query)
      hg19.knownGeneMrna.name (via humanHprdP2P.query)
      hg19.knownGenePep.name (via humanHprdP2P.query)
      hg19.knownIsoforms.transcript (via humanHprdP2P.query)
      hg19.knownToAllenBrain.name (via humanHprdP2P.query)
      hg19.knownToEnsembl.name (via humanHprdP2P.query)
      hg19.knownToGnfAtlas2.name (via humanHprdP2P.query)
      hg19.knownToHprd.name (via humanHprdP2P.query)
      hg19.knownToLocusLink.name (via humanHprdP2P.query)
      hg19.knownToPfam.name (via humanHprdP2P.query)
      hg19.knownToRefSeq.name (via humanHprdP2P.query)
      hg19.knownToSuper.gene (via humanHprdP2P.query)
      hg19.knownToTreefam.name (via humanHprdP2P.query)
      hg19.knownToU133.name (via humanHprdP2P.query)
      hg19.knownToVisiGene.name (via humanHprdP2P.query)
      hg19.mmBlastTab.query (via humanHprdP2P.query)
      hg19.rnBlastTab.query (via humanHprdP2P.query)
      hg19.scBlastTab.query (via humanHprdP2P.query)
      hg19.knownToHprd.name (via humanHprdP2P.target)
Sample Rows
querytargetdistance
uc002nxp.2uc002nxp.20
uc002nxp.2uc002nxo.10
uc002nxo.1uc002nxp.20
uc002nxo.1uc002nxo.10
uc002nxp.2uc001psf.21
uc002nxo.1uc001psf.21
uc002nxp.2uc011crb.12
uc002nxp.2uc003jve.22
uc002nxp.2uc003jvd.22
uc002nxp.2uc003jvc.22

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.