Schema for humanVidalP2P
Database: hg19    Primary Table: humanVidalP2P    Row Count: 586,182
Format description: Distance between two genes in expression space.
fieldexampleSQL type description
query uc004cwy.3varchar(255) Name of one gene
target uc004cwy.3varchar(255) Name of other gene
distance 0float Distance in expression space, always >= 0
Connected Tables and Joining Fields
      hg19.bioCycPathway.kgID (via humanVidalP2P.query)
      hg19.ccdsKgMap.geneId (via humanVidalP2P.query)
      hg19.ceBlastTab.query (via humanVidalP2P.query)
      hg19.dmBlastTab.query (via humanVidalP2P.query)
      hg19.drBlastTab.query (via humanVidalP2P.query)
      hg19.foldUtr3.name (via humanVidalP2P.query)
      hg19.foldUtr5.name (via humanVidalP2P.query)
      hg19.gnfAtlas2Distance.query (via humanVidalP2P.query)
      hg19.gnfAtlas2Distance.target (via humanVidalP2P.query)
      hg19.humanHprdP2P.query (via humanVidalP2P.query)
      hg19.humanHprdP2P.target (via humanVidalP2P.query)
      hg19.humanWankerP2P.query (via humanVidalP2P.query)
      hg19.humanWankerP2P.target (via humanVidalP2P.query)
      hg19.keggPathway.kgID (via humanVidalP2P.query)
      hg19.kg4ToKg5.newId (via humanVidalP2P.query)
      hg19.kgAlias.kgID (via humanVidalP2P.query)
      hg19.kgColor.kgID (via humanVidalP2P.query)
      hg19.kgProtAlias.kgID (via humanVidalP2P.query)
      hg19.kgProtMap2.qName (via humanVidalP2P.query)
      hg19.kgSpAlias.kgID (via humanVidalP2P.query)
      hg19.kgTargetAli.qName (via humanVidalP2P.query)
      hg19.kgTxInfo.name (via humanVidalP2P.query)
      hg19.kgXref.kgID (via humanVidalP2P.query)
      hg19.knownBlastTab.query (via humanVidalP2P.query)
      hg19.knownBlastTab.target (via humanVidalP2P.query)
      hg19.knownCanonical.protein (via humanVidalP2P.query)
      hg19.knownCanonical.transcript (via humanVidalP2P.query)
      hg19.knownGene.name (via humanVidalP2P.query)
      hg19.knownGeneMrna.name (via humanVidalP2P.query)
      hg19.knownGenePep.name (via humanVidalP2P.query)
      hg19.knownIsoforms.transcript (via humanVidalP2P.query)
      hg19.knownToAllenBrain.name (via humanVidalP2P.query)
      hg19.knownToEnsembl.name (via humanVidalP2P.query)
      hg19.knownToGnfAtlas2.name (via humanVidalP2P.query)
      hg19.knownToHprd.name (via humanVidalP2P.query)
      hg19.knownToLocusLink.name (via humanVidalP2P.query)
      hg19.knownToPfam.name (via humanVidalP2P.query)
      hg19.knownToRefSeq.name (via humanVidalP2P.query)
      hg19.knownToSuper.gene (via humanVidalP2P.query)
      hg19.knownToTreefam.name (via humanVidalP2P.query)
      hg19.knownToU133.name (via humanVidalP2P.query)
      hg19.knownToVisiGene.name (via humanVidalP2P.query)
      hg19.mmBlastTab.query (via humanVidalP2P.query)
      hg19.rnBlastTab.query (via humanVidalP2P.query)
      hg19.scBlastTab.query (via humanVidalP2P.query)
Sample Rows
querytargetdistance
uc004cwy.3uc004cwy.30
uc004cwy.3uc004cwx.30
uc004cwx.3uc004cwy.30
uc004cwx.3uc004cwx.30
uc004cwy.3uc003mkc.11
uc004cwy.3uc003mkb.11
uc004cwy.3uc003mka.11
uc004cwx.3uc003mkc.11
uc004cwx.3uc003mkb.11
uc004cwx.3uc003mka.11

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.