| field | example | SQL type | info | description |
|---|---|---|---|---|
| query | uc001aby.3 | varchar(255) | values | Name of sequence in this assembly (query) |
| target | NM_001033897 | varchar(255) | values | Name of sequence in other assembly (target) |
| identity | 74.07 | float | range | Percent identity |
| aliLength | 509 | int(10) unsigned | range | Length of alignment |
| mismatch | 121 | int(10) unsigned | range | Number of mismatches |
| gapOpen | 1 | int(10) unsigned | range | Number of gap openings |
| qStart | 29 | int(10) unsigned | range | Start in query (0 based) |
| qEnd | 538 | int(10) unsigned | range | End in query (non-inclusive) |
| tStart | 129 | int(10) unsigned | range | Start in target (0 based) |
| tEnd | 631 | int(10) unsigned | range | End in target (non-inclusive) |
| eValue | 0 | double | range | Expectation value |
| bitScore | 763.1 | double | range | Bit score |
| query | target | identity | aliLength | mismatch | gapOpen | qStart | qEnd | tStart | tEnd | eValue | bitScore |
|---|---|---|---|---|---|---|---|---|---|---|---|
| uc001aby.3 | NM_001033897 | 74.07 | 509 | 121 | 1 | 29 | 538 | 129 | 631 | 0 | 763.1 |
| uc001abz.3 | NM_001033897 | 75.42 | 602 | 137 | 2 | 135 | 736 | 31 | 631 | 0 | 910.2 |
| uc009vjq.2 | NM_001033897 | 74.79 | 607 | 141 | 2 | 135 | 741 | 31 | 631 | 0 | 910.2 |
| uc001aca.1 | NM_145671 | 92.98 | 627 | 26 | 1 | 0 | 627 | 0 | 625 | 0 | 1160.2 |
| uc001acb.1 | NM_145671 | 99.12 | 114 | 1 | 0 | 0 | 114 | 122 | 236 | 5.3e-61 | 228.4 |
| uc010nya.1 | NM_145671 | 99.12 | 114 | 1 | 0 | 0 | 114 | 122 | 236 | 5.3e-61 | 228.4 |
| uc010nyb.1 | NM_145671 | 100 | 71 | 0 | 0 | 0 | 71 | 275 | 346 | 3.2e-37 | 149.1 |
| uc001aci.2 | NM_024360 | 68 | 150 | 40 | 0 | 0 | 150 | 0 | 150 | 6.3e-54 | 205.3 |
| uc010nyc.1 | NM_024360 | 57.95 | 176 | 40 | 1 | 0 | 176 | 0 | 150 | 1.5e-49 | 191 |
| uc001ack.1 | NM_175754 | 74.65 | 1913 | 346 | 5 | 155 | 2045 | 50 | 1959 | 0 | 2986.8 |
Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.