UCSC Genome Browser on D. melanogaster Apr. 2006 (BDGP R5/dm3) Assembly

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position/search: size: 208 bp.
  • -
  • ncRNA Prediction and Mapping Tracks
Base Position
fRNAdb::snoRNA
fRNAdb::rRNA
fRNAdb::tRNA
fRNAdb::piRNA
fRNAdb::snRNA
fRNAdb::Misc
fRNAdb::fly smallRNA
   
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  • Small RNA Mapping Tracks
piRNAs by Brennecke
piRNAs by Yin
piRNAs by Nishida
AGO2 associated RNAs
piRNAs by Czech
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  • miRNA-related Tracks
Known miRNAs
Predicted miRNAs
Predicted targets
Stark's miRNAs
fRNAdb::pre-miRNA
fRNAdb::mature-miRNA
       
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  • Mapping and Sequencing Tracks
Chromosome Band
Assembly
Gap
GDP Insertions
BAC End Pairs
GC Percent
Short Match
Restr Enzymes
   
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  • Genes and Gene Prediction Tracks
FlyBase Genes
FB Noncoding
RefSeq Genes
N-SCAN
CONTRAST
EvoFold
       
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  • mRNA and EST Tracks
D. melanogaster mRNAs
Spliced ESTs
D. melanogaster ESTs
Other mRNAs
 
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  • Expression and Regulation
ORegAnno
       
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  • Comparative Genomics
Conservation
Most Conserved
A. gambiae Chain
A. gambiae Net
D. pseudo. Chain
D. pseudo. Net
D. persimilis Chain
D. persimilis Net
D. ananassae Chain
D. ananassae Net
D. erecta Chain
D. erecta Net
D. yakuba Chain
D. yakuba Net
D. sechellia Chain
D. sechellia Net
D. simulans Chain
D. simulans Net
   
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  • Variation and Repeats
RepeatMasker
Simple Repeats