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fRNAdb: A comprehensive non-coding RNA sequence database
- doc
  - fRNAdb::API
  - fRNAdb::API(Japanese)
- URL Updated
- News
  - Catalog page released
UCSC GenomeBrowser for Functional RNA
- UCSC GenomeBrowser Gateway
Idiographica - Create Your Own Idiograms On-demand!
- Samples
- Description Format Specification
- Chromosome ID
- HELP::Background
Bioinformatcs Tools for RNAs
- MXSCARNA
  - DOWNLOAD
  - SUPPLEMENTARY INFORMATION
  - dataset_mxscarna.tar.gz
  - dataset_mxscarna_2.tar.gz
  - reference.txt
  - Experimental Results
  - sps.jpg
  - mcc.jpg
  - summary_sps_mcc
  - time1
  - time2
  - time3
  - mxscarna_ver1.9.tar.gz
  - mxscarna_ver2.00_011608.tar.gz
  - mxscarna_ver2.1_060309.tar.gz
- Murlet
  - Dataset
  - Dataset (readme)
  - Source Code
  - Source Code (readme)
  - Supplementary Text
  - Experimental Results
  - length time
  - length memory
  - murlet-0_0_1.tgz
- RNAmine
  - Results of RNAmine
- SCARNA
  - Experimental Results
  - sps_sci
  - sps
  - mcc
  - time_comparison
- PHMMTS
  - Experimental Results
- PSTAG
  - Experimental Results
  - fig8.png
  - fig9.png
  - fig10.png
- Rfold
  - Rfold source (tar gz format)
  - readme file for source code
  - readme file for dataset
  - Rfold dataset (tar gz format)
  - Experimental Results
  - Accuracy comparison with RNALfold
  - Comparison with RNAplfold
  - RfoldSuppl
- Stem Kernels
  - stem_kernel-296a.tar.gz
  - stem_kernel-216.tar.gz
  - stem_kernel-216b.tar.gz
  - stem_kernel-216c.tar.gz
  - README
  - JBCB version
- download
- CentroidAlifold
  - Download
  - Reference
- CentroidHomfold
  - CentroidHomfold-LAST Web-server
  - References
  - Standalone Pipeline system of CentroidHomfold-LAST
  - Supplementary Information of the paper in ISMB2009
  - Help for Web application (CentroidHomfold-LAST pipeline)
  - Download
  - Download (previous version)
  - log_pipeline
  - centroidhomfold-last-v1.0-pipeline
- CentroidAlign
  - Download
  - Reference
- miRRim
  - About miRRim
  - Evaluation
  - fig1.PNG
  - HMM
- SCARNA_LM
  - DOWNLOAD
  - SUPPLEMENTARY INFORMATION
  - learning_dataset.tar.gz
  - dataset.tar.gz
  - cross_varidation_dataset.tar.gz
  - DOWNLOAD
  - scarna_lm_ver2.1.tar.gz
  - scarna_lm_ver2.2.tar.gz
- npbfold
  - Supplementary Information
- RactIP
  - RactIP webserver
  - Code repository
  - ractip-0.0.2.tar.gz
  - ractip-0.0.2-mingw32.zip
  - ractip-0.0.2-i486-linux.tar.gz
  - ractip-0.0.1.tar.gz
- IPknot
  - IPknot webserver
  - Code repository
  - ipknot-0.0.2.tar.gz
  - ipknot-0.0.2-i486-linux.tar.gz
  - ipknot-0.0.2-x86_64-linux.tar.gz
  - ipknot-0.0.2-mingw32.zip
  - ipknot-0.0.2-macosx10.5.tar.gz
  - dataset.tar.gz
- Raccess
  - Raccess C++ Source Code
  - Raccess Readme File
  - Raccess Array Data
  - Raccess Array Methods
  - Raccess Supplementary Method
- Fdur
  - fdur_source.zip
  - fdur_readme.txt
  - fdur_suppl.pdf
- Rentropy
  - rentropy.source
  - rentropy.readme
- Rchange
  - rchange.source
  - rchange.readme
  - trna.fa
  - trna_orig
  - bp_color
  - rchange_out.txt
  - trna_fmut
  - trna_emut
  - trna_smut
  - trna_a13g
  - trna_g3u
  - trna_c70a
  - trna_u5a
  - trna_g23u
  - Supplementary Text
  - Rchange Dataset
- DAFS
  - README
  - dafs-0.0.2.tar.gz
  - dafs-0.0.2-x86_64-linux.tar.gz
  - datasets.tar.gz
  - Code repository
  - dafs-0.0.1.tar.gz
The Contents of Genomes
- What's the Contents of Genomes
JSBi2007 Top Page
- JSBi2007 Program
- JSBi2007 Committees
- JSBi2007 Call for Abstracts
- JSBi2007 Abstract Submission
- JSBi2007 Sponsors
  - Japanese Society for Bioinformatics
  - Computational Biology Research Center
- JSBi2007 Keynotes
- 日本語ホーム
- Registration
ジャーナルクラブ|論文紹介|Journal Club|
- 2008年度ジャーナルクラブ
- 2007年度ジャーナルクラブ
- 2006年度旧数理チーム　目次紹介
About This Site
Members
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Tracks
- hg19
- mm9
- rn4
- dm3
- ce6
  - cds-homology.psl.gz
  - cds-homology.html
- cb3
- hg18
  - hg18-numts.psl.gz
  - numt-alignments.html
- panTro2
  - panTro2-numts.psl.gz
  - numt-alignments.html
- rheMac2
  - rheMac2-numts.psl.gz
  - numt-alignments.html
earthquake
message20110316-a
Message20110314
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CentroidFold
RNA Bibliography
Project Specific Custom Tracks
CentroidHomfold

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