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Murlet
Murlet is a practical alignment tool for structural RNA sequences. It is based on the Sankoff algorithm and uses an efficient scoring system that considerably reduces the time and space requirements without degrading alignment quality.
Reference
Murlet: a practical multiple alignment tool for structural RNA sequences.
Hisanori Kiryu, Yasuo Tabei, Taishin Kin, and Kiyoshi Asai
Bioinformatics, doi:10.1093/bioinformatics/btm146. [Supplementary Text]
Web Server
Available at http://murlet.ncrna.org/murlet/murlet.htmlDataset (tar gz format)
murlet_dataset.tgzsee readme.txt for description.
C++ Source Code (tar gz format)
murlet-0_0_1.tgz (Updated April, 18, 2011)
murlet.tgz (Original Version. March, 23, 2008)
see readme.txt for description.
Experimental Results
Click here for a summary of experimental results presented in our paper.
For more details, see the above reference.
