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Pair Stochastic Tree Adjoining Grammars
PSTAG (Pair Stochastic Tree Adjoining Grammars) for RNA sequences including pseudoknotted structures.
References
Matsui, H., Sato, K. and Sakakibara, Y.: Pair stcochastic tree adjoining grammars for aligning and predicting pseudoknot RNA structures. Bioinformatics, 2005, 21, 2611-2617 [pubmed]Experimental Results
Click hereSee Also
http://pstag.dna.bio.keio.ac.jp/
http://software.ncrna.org/