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The Contents of Genomes presents you a *basic* statistics of genome contents for human, mouse and rat. We assigned every base in a genome to a genomic content so that users can grasp how many bases are correspond to exons, introns, UTRs, repetitive elements , etc. at a glance. The assignment is based on the genome annotation information provided by the UCSC Genome Browser. You can find the full documentation here.

Human Mar. 2006 (NCBI36/hg18) Assembly

Contents of Human Genome (hg18)

HumanPieChart
viewBases (bp)%Class
None1,015,000,63432.95intergenic
LINE607,052,95119.71repeat
intron580,090,70518.83intron
SINE381,736,73412.39repeat
LTR245,447,7337.97repeat
DNA transposon85,508,1592.78repeat
tandem54,345,9461.76repeat
exon33,018,3651.07exon
UTR25,627,1110.83UTR
genscan exon15,953,2090.52exon
low complexity13,784,6550.45repeat
simple repeat11,418,3500.37repeat
pseudo UTR4,232,4700.14UTR
Satellite3,289,1430.11repeat
Other2,304,6840.07repeat
RNA1,387,0460.05RNA
Unknown172,8020.01repeat
miRNA41,6590.0RNA
pseudo exon7,1240.0exon
Whole Genome3,080,419,480100.0Whole Genome

This chart is made with Google Chart API.


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