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The Contents of Genomes presents you a *basic* statistics of genome contents for human, mouse and rat. We assigned every base in a genome to a genomic content so that users can grasp how many bases are correspond to exons, introns, UTRs, repetitive elements , etc. at a glance. The assignment is based on the genome annotation information provided by the UCSC Genome Browser. You can find the full documentation here.

Mouse Feb. 2006 Assembly

Contents of Mouse Genome (mm8)

MousePieChart
viewBases (bp)%Class
None937,772,95935.47intergenic
intron543,168,04720.54intron
LINE508,061,87319.22repeat
LTR253,415,3709.58repeat
SINE186,872,3527.07repeat
tandem76,876,4562.91repeat
exon30,657,0691.16exon
UTR24,130,2680.91UTR
DNA transposon21,931,4820.83repeat
genscan exon18,901,5890.71exon
simple repeat18,061,8850.68repeat
low complexity14,517,6940.55repeat
Other7,192,0920.27repeat
RNA1,254,4170.05RNA
Unknown883,1920.03repeat
Satellite349,2180.01repeat
miRNA31,7260.0RNA
Whole Genome2,644,077,689100.0Whole Genome

This chart is made with Google Chart API.


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