Murlet
Murlet is a practical alignment tool for structural RNA sequences.
It is based on the Sankoff algorithm
and uses an efficient scoring system
that considerably reduces the time and space requirements
without degrading alignment quality.
Citation
Murlet: A practical multiple alignment tool for structural RNA sequences
Hisanori Kiryu; Yasuo Tabei; Taishin Kin; Kiyoshi Asai
Bioinformatics 2007; doi: 10.1093/bioinformatics/btm146
[Abstract]
[PDF]
Dataset (tar gz format)
murlet_dataset.tgz
see readme.txt for description.
C++ Source Code (tar gz format)
murlet.tgz
see readme.txt for description.