Rfold

Rfold computes local base pairing probabilities for long DNA sequences.

Reference

Rfold: An exact algorithm for computing local base pairing probabilities,
Hisanori Kiryu; Taishin Kin; Kiyoshi Asai,
Bioinformatics 2007; doi: 10.1093/bioinformatics/btm591,
Supplement: rfold_suppl.pdf (143 KB)

Source Code

Dataset

Experimental Results

For more information, see the original reference.